CLUSTAL
MULTIPLE SEQUENCE ALIGNMENT



ClustalX
Documentation
Multiple Alignment Tutorial
ClustalW
$doc/clustalw/clustalw.asc
ClustalW Web site


The CLUSTAL programs perform multiple sequence alignments using hierarchical clustering. ClustalW is the direct successor of ClustalV. These programs perform multiple DNA or protein alignments by first doing all possible pairwise alignments, constructing a distance tree, and then aligning sequences based on their order in the tree. ClustalW can be run from the  command line by typing 'clustalw'.  ClustalX is a graphic interface to clustalw. It can be launched from GDE, or from the workspace menu, (Alignment --> ClustalX'), or from the command line ('clustalx')
 

ClustalX Screenshot